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Whole-mitochondrial genome sequencing in primary open-angle glaucoma using massively parallel sequencing identifies novel and known pathogenic variants

  • Periasamy Sundaresan
  • , David A. Simpson
  • , Chitra Sambare
  • , Seamus Duffy
  • , Judith Lechner
  • , Aditi Dastane
  • , Edward W. Dervan
  • , Neeru Vallabh
  • , Vidya Chelerkar
  • , Madan Deshpande
  • , Colm O'Brien
  • , Amy Jayne McKnight
  • , Colin Willoughby

Research output: Contribution to journalArticlepeer-review

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Abstract

PURPOSE:The aim of this study was to determine whether mutations in mitochondrial DNA play a role in high-pressure primary open-angle glaucoma (OMIM 137760) by analyzing new data from massively parallel sequencing of mitochondrial DNA.METHODS:Glaucoma patients with high-tension primary open-angle glaucoma and ethnically matched and age-matched control subjects without glaucoma were recruited. The entire human mitochondrial genome was amplified in two overlapping fragments by long-range polymerase chain reaction and used as a template for massively parallel sequencing on an Ion Torrent Personal Genome Machine. All variants were confirmed by conventional Sanger sequencing.RESULTS:Whole-mitochondrial genome sequencing was performed in 32 patients with primary open-angle glaucoma from India (n = 16) and Ireland (n = 16). In 16 of the 32 patients with primary open-angle glaucoma (50% of cases), there were 22 mitochondrial DNA mutations consisting of 7 novel mutations and 8 previously reported disease-associated sequence variants. Eight of 22 (36.4%) of the mitochondrial DNA mutations were in complex I mitochondrial genes.CONCLUSION:Massively parallel sequencing using the Ion Torrent Personal Genome Machine with confirmation by Sanger sequencing detected a pathogenic mitochondrial DNA mutation in 50% of the primary open-angle glaucoma cohort. Our findings support the emerging concept that mitochondrial dysfunction results in the development of glaucoma and, more specifically, that complex I defects play a significant role in primary open-angle glaucoma pathogenesis.
Original languageEnglish
Pages (from-to)279-284
Number of pages5
JournalGenetics in Medicine
Volume17
Issue number4
DOIs
Publication statusAccepted/In press - 7 Aug 2014

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Genetics
  • Glaucoma
  • Mitochondrial genome
  • Next-generation sequencing

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