Connectivity Mapping for Candidate Therapeutics Identification Using Next Generation Sequencing RNA-Seq Data

Darragh G. McArt; Philip D. Dunne; Jaine K. Blayney; Manuel Salto-Tellez; Sandra Van Schaeybroeck; Peter W. Hamilton; Shu-Dong Zhang

doi:10.1371/journal.pone.0066902

Connectivity Mapping for Candidate Therapeutics Identification Using Next Generation Sequencing RNA-Seq Data

Darragh G. McArt, Philip D. Dunne, Jaine K. Blayney, Manuel Salto-Tellez, Sandra Van Schaeybroeck, Peter W. Hamilton, Shu-Dong Zhang

Faculty Of Life & Health Sciences

Research output: Contribution to journal › Article › peer-review

16 Citations (Scopus)

22 Downloads (Pure)

Original language	English
Pages (from-to)	e66902
Journal	PLoS ONE
Volume	8
Issue number	6
DOIs	https://doi.org/10.1371/journal.pone.0066902
Publication status	Published (in print/issue) - 2013

Keywords

Connectivity Mapping
sscMap
Next Generation Sequencing (NGS)
RNA-Seq
cotinine
LNCaP cells

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

Access to Document

10.1371/journal.pone.0066902

2013-0626-Plos-one-Rna-seq-sscMap-journalFinal published version, 1.67 MB

Cite this

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title = "Connectivity Mapping for Candidate Therapeutics Identification Using Next Generation Sequencing RNA-Seq Data",

keywords = "Connectivity Mapping, sscMap, Next Generation Sequencing (NGS), RNA-Seq, cotinine, LNCaP cells",

author = "McArt, {Darragh G.} and Dunne, {Philip D.} and Blayney, {Jaine K.} and Manuel Salto-Tellez and {Van Schaeybroeck}, Sandra and Hamilton, {Peter W.} and Shu-Dong Zhang",

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language = "English",

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T1 - Connectivity Mapping for Candidate Therapeutics Identification Using Next Generation Sequencing RNA-Seq Data

AU - McArt, Darragh G.

AU - Dunne, Philip D.

AU - Blayney, Jaine K.

AU - Salto-Tellez, Manuel

AU - Van Schaeybroeck, Sandra

AU - Hamilton, Peter W.

AU - Zhang, Shu-Dong

PY - 2013

Y1 - 2013

KW - Connectivity Mapping

KW - sscMap

KW - Next Generation Sequencing (NGS)

KW - RNA-Seq

KW - cotinine

KW - LNCaP cells

U2 - 10.1371/journal.pone.0066902

DO - 10.1371/journal.pone.0066902

M3 - Article

SN - 1932-6203

VL - 8

SP - e66902

JO - PLoS ONE

JF - PLoS ONE

IS - 6

ER -