A generic Transcriptomics Reporting Framework (TRF) for ‘omics data processing and analysis

Timothy W. Gant; Ursula G. Sauer; Shu-Dong Zhang; Brian N. Chorley; Jörg Hackermüller; Stefania Perdichizzi; Knut E. Tollefsen; Ben van Ravenzwaay; Carole Yauk; Weida Tong; Alan Poole

doi:10.1016/j.yrtph.2017.11.001

A generic Transcriptomics Reporting Framework (TRF) for ‘omics data processing and analysis

Timothy W. Gant, Ursula G. Sauer, Shu-Dong Zhang, Brian N. Chorley, Jörg Hackermüller, Stefania Perdichizzi, Knut E. Tollefsen, Ben van Ravenzwaay, Carole Yauk, Weida Tong, Alan Poole

Research output: Contribution to journal › Article › peer-review

34 Citations (Scopus)

Original language	English
Pages (from-to)	S36-S45
Journal	Regulatory Toxicology and Pharmacology
Volume	91
DOIs	https://doi.org/10.1016/j.yrtph.2017.11.001
Publication status	Published (in print/issue) - 4 Nov 2017

Keywords

Regulatory toxicology
Normalisation of ‘omics data
Statistical analysis
Differentially expressed genes
Reproducibility
Bioinformatics
Gene expression

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

Access to Document

10.1016/j.yrtph.2017.11.001

Cite this

@article{efe436a3217a41e39acdf0cecbffefa0,

title = "A generic Transcriptomics Reporting Framework (TRF) for {\textquoteleft}omics data processing and analysis",

keywords = "Regulatory toxicology, Normalisation of {\textquoteleft}omics data, Statistical analysis, Differentially expressed genes, Reproducibility, Bioinformatics, Gene expression",

author = "Gant, {Timothy W.} and Sauer, {Ursula G.} and Shu-Dong Zhang and Chorley, {Brian N.} and J{\"o}rg Hackerm{\"u}ller and Stefania Perdichizzi and Tollefsen, {Knut E.} and {van Ravenzwaay}, Ben and Carole Yauk and Weida Tong and Alan Poole",

year = "2017",

month = nov,

day = "4",

doi = "10.1016/j.yrtph.2017.11.001",

language = "English",

volume = "91",

pages = "S36--S45",

journal = "Regulatory Toxicology and Pharmacology",

issn = "1096-0295",

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T1 - A generic Transcriptomics Reporting Framework (TRF) for ‘omics data processing and analysis

AU - Gant, Timothy W.

AU - Sauer, Ursula G.

AU - Zhang, Shu-Dong

AU - Chorley, Brian N.

AU - Hackermüller, Jörg

AU - Perdichizzi, Stefania

AU - Tollefsen, Knut E.

AU - van Ravenzwaay, Ben

AU - Yauk, Carole

AU - Tong, Weida

AU - Poole, Alan

PY - 2017/11/4

Y1 - 2017/11/4

KW - Regulatory toxicology

KW - Normalisation of ‘omics data

KW - Statistical analysis

KW - Differentially expressed genes

KW - Reproducibility

KW - Bioinformatics

KW - Gene expression

U2 - 10.1016/j.yrtph.2017.11.001

DO - 10.1016/j.yrtph.2017.11.001

M3 - Article

C2 - 29113939

SN - 1096-0295

SN - 0273-2300

VL - 91

SP - S36-S45

JO - Regulatory Toxicology and Pharmacology

JF - Regulatory Toxicology and Pharmacology

ER -